![]() ![]() ![]() Once you switched to the correct directory, start the Fiji launcher: If you unpacked Fiji onto your desktop, do this: For example, if you installed Fiji into /Applications as recommended, do this: Note that the application itself is actually a directory called Fiji.app. To do so, start a Terminal (in the Finder, Go>Utilities), and switch to the correct directory using the cd command. Often it is necessary to run Fiji in the command line, e.g. In the alternative, you can put in a considerable effort to "backport" OpenJDK :-). If you require Fiji to run on earlier versions of MacOSX, you will have to go back to SoyLatte, where you will also find an X11-only OpenJDK version that runs on MacOSX 10.5/PowerPC (MacOSX 10.6+ does not support PowerPC). Since the development of OpenJDK for MacOSX is driven exclusively by Apple employees, the minimal MacOSX version required to run OpenJDK/Aqua is 10.6. ![]() If you are experiencing problems, say, with AWT-AppKit related crashes, and if you do not mind working with an X11-based graphical user display, you might want to try OpenJDK.Īs of mid-April 2011, OpenJDK for MacOSX has basic working support for Aqua, which you have to activate explicitly by passing the Java option faultlaf=. So far, only Snow Leopard and later are supported, and preliminary builds can be found here. It is based on an Apple-backed effort to get a proper MacOSX backend into the BSD port of OpenJDK. Oracle now supports MacOSX JavaSE 7 officially. Otherwise, access the plugins folder as explained above and just drag and drop any plugin into the plugins folder, like you would do for ImageJ. To access the plugins or macros folders, set the Finder window to either icons or lists mode, not in column mode, and double-click them.Īlternatively, right-click (or ^ Ctrl+ click) the Fiji.app and select "Show package contents", to open the folder where the actual plugins and macros folders are.įor plugins, please follow the instructions about Installing 3rd party plugins. static/soylatte/ Accessing the plugins and macros folders Then you can proceed with the generic Fiji Installation You can also install the SoyLatte Binaries, as an alternate choice. You will need a working X11 server, that you can find on your OS X disk, and MacPorts.Įxecute sudo port install openjdk6 on your Terminal. You can also install a third party Java 6, part of the OpenJDK project. In addition, we will not be able to support Java versions prior to Java 1.6 at some stage, since that version offers a few features we want to rely on, such as a versatile scripting framework. Note: There is no Java 1.6 for PowerPC from Apple, meaning that Java comes at a considerable performance penalty on this platform. We offer a special intermediate release of Fiji specific to PowerPC Macs (G4/G5). If your maximum memory is set higher than the 32-bit limit, Fiji will not be able to start up successfully in 32-bit mode. Launch Fiji again, and the status bar should report "" in brackets.Īlternately, you can execute the following code from the Terminal:Īrch -i386 /Applications/Fiji.app/Contents/MacOS/ImageJ-macosxĮither way, you will need to make sure your maximum memory limit is set below ~1800 MB.Press the red X on the Fiji info window to close it.Check the "Open in 32-bit mode" box in the Fiji info window.^ Ctrl+ click on the Fiji application icon that pops up, and choose Show Info (or press ⌘ Cmd+ I).^ Ctrl+ click the Fiji dock icon and choose Options › Show in Finder.Reduce your Maximum Memory setting to ~1800 MB or less.Launch Fiji normally, and choose Edit › Options › Memory & Threads.If you need to run it in 32-bit mode, you can do so as follows: See this bug report for details.įiji on Intel Macs runs on Java 1.6 in 64-bit mode. It may no longer be possible to start Fiji in 32-bit on recent versions of OS X.
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